A validated ordinal diagrammatic severity scale for zucchini yellow mosaic virus in Cucurbita moschata: Screening for tolerant accessions in Peru

Autores/as

  • Fiorella Gonzales-Borda Department of Plant Pathology, Agronomy Faculty, Universidad Nacional Agraria La Molina, Lima, Perú.
  • Dustin Marin-Gil Department of Plant Pathology, Agronomy Faculty, Universidad Nacional Agraria La Molina, Lima, Perú.
  • Isabel Montes-Yarasca Department of Horticulture, Agronomy Faculty, Vegetable Crop Group, Universidad Nacional Agraria La Molina, Lima, Perú.
  • Alexis Dueñas-Dávila Department of Horticulture, Agronomy Faculty, Vegetable Crop Group, Universidad Nacional Agraria La Molina, Lima, Perú.
  • Alejandro Risco-Mendoza Department of Plant Pathology, Agronomy Faculty, Universidad Nacional Agraria La Molina, Lima, Perú.

DOI:

https://doi.org/10.17268/sci.agropecu.2025.062

Palabras clave:

aligned rank transform, DAS-ELISA, kappa test, phytopathometry, plant disease epidemiology, potyvirus, resistance breeding, tropical pumpkin

Resumen

The squash (Cucurbita moschata), a landrace crop with a denomination of origin in Lambayeque, Peru, represents a valuable genetic resource with potential for tolerance or resistance to potyviruses. Among these, zucchini yellow mosaic virus (ZYMV) is one of the most destructive viral pathogens affecting cucurbits worldwide. This study aimed validate a diagrammatic ordinal scale for assessing ZYMV disease severity under field conditions and to identify resistant accessions. Sixteen accessions were evaluated under natural infection in an experimental field of the Vegetable Research Program at the Universidad Nacional Agraria La Molina, Peru. Following previous virus confirmation via RT-PCR and HTS sequencing, disease monitoring included symptom characterization and virus detection by DAS-ELISA, which confirmed a high incidence of ZYMV. Utilizing a dataset of 40 leaf samples representing different severity levels, a four-level ordinal diagrammatic scale was developed by integrating visual foliar symptomatology with relative viral concentration (optical density) obtained from DAS-ELISA. The scale was validated through field evaluations using independent raters, and its reliability was assessed using Fleiss’ kappa and Cohen’s kappa statistics. The proposed scale demonstrated high biological accuracy, revealing a strong, highly significant correlation between visual severity levels and serological viral concentration (Spearman's ρ = 0.937, p < 0.0001). Inter-rater reliability assessments confirmed strong overall reproducibility among independent evaluators (Fleiss’ kappa = 0.608, p < 0.001). Statistical analysis revealed a highly significant differential response among genotypes; accession C44 exhibited the lowest and most stable severity levels, closely followed by C09, establishing them as highly promising sources of resistance. This study provides a reliable tool for ZYMV severity assessment and supports the identification of genetic resources for resistance breeding programs in cucurbits. The scale developed in this study will help standardize symptom assessment and improve the identification and selection of resistant plant materials, thereby enhancing the efficiency of resistance breeding programs.

Referencias

Ahsan, M., Ashfaq, M., Amer, M. A., Shakeel, M. T., Mehmood, M. A., Umar, M., & Al-Saleh, M. A. (2023). Zucchini yellow mosaic virus (ZYMV) as a serious biotic stress to cucurbits: Prevalence, diversity, and its implications for crop sustainability. Plants, 12(19), 3503. https://doi.org/10.3390/plants12193503

Abdel Aleem, E. E., Rabie, M., & Fattouh, F. A. (2021). Molecular characterisation of zucchini yellow mosaic virus infecting Cucurbita pepo in Egypt. Plant Protection Science, 57(4), 263–270. https://doi.org/10.17221/191/2020-PPS

Ali, R., Eldidamony, G., Askora, A., & Galal, A. (2024). Investigates the ability of plant extracts from Lens culinaris to protect zucchini from the Zucchini yellow mosaic virus (ZYMV). Scientific Reports, 14(1), 12257. https://doi.org/10.1038/s41598-024-62128-6

Arbizu, C. I., Blas, R. H., & Ugás, R. (2022). Genetic diversity and population structure assessed by SSR in a Peruvian germplasm collection of loche squash (Cucurbita moschata, Cucurbitaceae). Biology and Life Sciences Forum, 6, 20. https://doi.org/10.3390/iecd2022-12420

Blua, M. J., & Perring, T. M. (1989). Effect of zucchini yellow mosaic virus on development and yield of cantaloupe (Cucumis melo). Plant Disease, 73(4), 317-320. https://doi.org/10.1094/PD-73-0317

Bock, C. H., Chiang, K. S., & Del Ponte, E. M. (2022). Plant disease severity estimated visually: A century of research, best practices, and opportunities for improving methods and practices to maximize accuracy. Tropical Plant Pathology, 47, 25–42. https://doi.org/10.1007/s40858-021-00439-z

Boissinot, S., Pichon, E., Sorin, C., Piccini, C., Scheidecker, D., Ziegler-Graff, V., & Brault, V. (2017). Systemic propagation of a fluorescent infectious clone of a polerovirus following inoculation by Agrobacteria and aphids. Viruses, 9(7), 166. https://doi.org/10.3390/v9070166

Brown, R. N., Bolaños-Herrera, A., Myers, J. R., & Miller Jahn M. (2003). Inheritance of resistance to four cucurbit viruses in Cucurbita moschata. Euphytica, 129(3), 253–258. https://doi.org/10.1023/A:1022224327064

Caligiore-Gei, P. F., Della-Gaspera, P., Benitez, E., & Tarnowski, C. (2022). Cucurbit Powdery Mildew: First Insights for the Identification of the Causal Agent and Screening for Resistance of Squash Genotypes (Cucurbita moschata (Duchesne ex Lam.) Duchesne ex Poir.) in Mendoza, Argentina. The Plant Pathology Journal, 38(4), 296. https://doi.org/10.5423/ppj.oa.01.2022.0002

Candian, J. S., Coolong, T., Dutta, B., Srinivasan, R., Sparks, A., Barman, A., & Ribeiro, A. (2021). Selection of yellow squash and zucchini cultivars for resistance to cucurbit leaf crumple virus in the southeastern United States. HortTechnology, 31(4), 504–513. https://doi.org/10.21273/HORTTECH04877-21

Chen, T. C., Kang, Y. C., Tran, T. N. B., Huang, L. H., Lin, C. C., & Yeh, S. D. (2026). Generation of a Bivalent Recombinant Vaccine Conferring Dual Protection Against Potyvirus and Orthotospovirus in Cucurbits. Viruses, 18(2), 250. https://doi.org/10.3390/v18020250

Desbiez, C. (2020). The never-ending story of cucurbits and viruses. Acta Horticulturae, 1294, 173–191. https://doi.org/10.17660/ActaHortic.2020.1294.23

de la Iglesia, F., & Elena, S. F. (2023). Effect of disease prevalence and growth stage on symptom severity in the Turnip mosaic virus–Arabidopsis thaliana pathosystem. Journal of Plant Protection Research, 63(3), 297–305. https://doi.org/10.24425/jppr.2023.145762

Dhillon, N. P. S., Srimat, S., Laenoi, S., Bhunchoth, A., Phuangrat, B., Warin, N., & Kenyon, L. (2021). Resistance to three distinct begomovirus species in the agronomical superior tropical pumpkin line AVPU1426 developed at the World Vegetable Center. Agronomy, 11(6), 1256. https://doi.org/10.3390/agronomy11061256

Díaz, A., Quiñones, M., Arana, F., Soto, M., & Hernández, A. (2010). Potyvirus: Características generales, diagnóstico y presencia en pimiento en Cuba. Protección Vegetal, 25(2), 69–79.

Do Nascimento, S. C., Scheuermann, K. K., Pereira, F. S., Gorayeb, E. S., Albuquerque, M. R. M., Mendes, G. C., de Mello, R. N., Lau, D., & da Silva, F. N. (2024). Development of a severity scale and an RT-qPCR assay for screening resistance levels in rice genotypes against rice stripe necrosis virus and its vector. Plant Pathology, 73, 2101–2111. https://doi.org/10.1111/ppa.13952

Elbaz, M., Timoumi, M., & Hanson, P. (2022). Behavior of new entries and developed tomato hybrids carrying Ty-2 genes. Tunisian Journal of Plant Protection, 17(1), 1–14. https://doi.org/10.52543/tjpp.17.1.1

Fidan, H., Calis, O., Ari, E., Atasayar, A., Sarikaya, P., Tek, M. I., Izmirli, A., Oz, Y., & Firat, G. (2023). Knockout of eIF4E using CRISPR/Cas9 for large-scale production of resistant cucumber cultivar against WMV, ZYMV, and PRSV. Frontiers in Plant Science, 14, 1143813. https://doi.org/10.3389/fpls.2023.1143813

Gea-Caballero, E., & Aranda, M. A. (2026). Cucumber green mottle mosaic virus: A persistent seed-borne threat to cucurbits. Annals of Applied Biology, 189(1). https://doi.org/10.1111/aab.70136

Ghanem, G. A. M., Mahmoud, A. M. A., Kheder, A. A., Gebily, D. A., & Osamy, A. (2023). Antiviral activities of three Streptomyces spp. against Zucchini yellow mosaic virus (ZYMV) infecting squash (Cucurbita pepo L.) plants. Egyptian Journal of Biological Pest Control, 33(1). https://doi.org/10.1186/s41938-023-00750-8

Ghoshal, C., Das, K., Mandal, S., & Kumar, S. (2026). Host Plant Resistance to Important Viruses in Cucurbits- Current Challenges and Advances. Microbiology Research Journal International, 36(2), 1–24. https://doi.org/10.9734/mrji/2026/v36i21703

Gilbert-Albertini, F., Lecoq, H., Pitrat, M., et al. (1993). Resistance of Cucurbita moschata to watermelon mosaic virus type 2 and its genetic relationship to resistance to zucchini yellow mosaic virus. Euphytica, 69, 231–237. https://doi.org/10.1007/BF00022369

González-Concha, L. F., Ramírez-Gil, J. G., García-Estrada, R. S., Rebollar-Alviter, Á., & Tovar-Pedraza, J. M. (2021). Spatiotemporal analyses of tomato brown rugose fruit virus in commercial tomato greenhouses. Agronomy, 11(7), 1268. https://doi.org/10.3390/agronomy11071268

Gupta, D., Singh, O. W., Basavaraj, Y. B., Roy, A., Mukherjee, S. K., & Mandal, B. (2021). Direct Foliar Application of dsRNA Derived From the Full-Length Gene of NSs of Groundnut Bud Necrosis Virus Limits Virus Accumulation and Symptom Expression. Frontiers in Plant Science, 12, 734618. https://doi.org/10.3389/fpls.2021.734618

Han, X., Chen, T., Yue, R., Guo, S., Xu, M., Lu, C., Fan, Y., Chen, N., Liu, L., Fu, X., Chi, H., Guo, X., Xia, Y., & Tie, S. (2019). A rice black-streaked dwarf virus replication curve model to evaluate maize rough dwarf disease resistance. Plant Disease, 103(5), 868–873. https://doi.org/10.1094/PDIS-09-18-1532-RE

Hao, X., Liu, F., Liu, L., et al. (2024). Zucchini yellow mosaic virus-induced hypersensitive response is associated with pathogenesis-related protein 1 expression and confers resistance in watermelon. Plant Cell Reports, 43, 277. https://doi.org/10.1007/s00299-024-03364-y

Ibiza, V. P., Cañizares, J., & Nuez, F. (2010). EcoTILLING in Capsicum species: Searching for new virus resistances. BMC Genomics, 11, 631. https://doi.org/10.1186/1471-2164-11-631

Jeger, M. J. (2022). Tolerancia a las enfermedades virales de las plantas: su significado genético, fisiológico y epidemiológico. Food and Energy Security, 12, e440. https://doi.org/10.1002/fes3.440

Kheder, A., Sulaiman, T., Ghanem, G., & Tohamy, M. (2017). Biological, Serological and Molecular Characterization of Egyptian Zucchini Yellow Mosaic Virus Isolate Infecting Squash Plants in Fayoum Governorate. Egyptian Journal of Phytopathology, 45(2), 1–14. https://doi.org/10.21608/ejp.2017.88570

Lecoq, H., & Desbiez, C. (2008). Watermelon mosaic virus and zucchini yellow mosaic virus. In B. W. J. Mahy & M. H. V. Van Regenmortel (Eds.), Encyclopedia of virology (3rd ed., pp. 468-474). Academic Press. https://doi.org/10.1016/B978-012374410-4.00740-8

Li, M., Qiu, Y., Zhu, D., Xu, X., Tian, S., Wang, J., Yu, Y., Ren, Y., Gong, G., Zhang, H., Xu, Y., & Zhang, J. (2024). Editing eIF4E in the watermelon genome using CRISPR/Cas9 technology confers resistance to ZYMV. International Journal of Molecular Sciences, 25(21), 11468. https://doi.org/10.3390/ijms252111468

Madden, L. V., Paul, P. A., & Lipps, P. E. (2007a). Consideration of nonparametric approaches for assessing genotype-by-environment (G × E) interaction with disease severity data. Plant Disease, 91, 891–900. https://doi.org/10.1094/PDIS-91-7-0891

Madden, L. V., Hughes, G., & van den Bosch, F. (2007b). The study of plant disease epidemics. APS Press. https://doi.org/10.1094/9780890545058

Mahmoud, S. Y., Zia, A., Farrag, E. S., et al. (2025). Characterization of two distinct isolates of zucchini yellow mosaic potyvirus and their differential effects on photochemistry and photoprotection of the host plant. European Journal of Plant Pathology. https://doi.org/10.1007/s10658-025-03161-7

Metwally, R. A., Taha, M. A., Abd El-Moaty, N. M., & Abdelhameed, R. E. (2024). Attenuation of Zucchini mosaic virus disease in cucumber plants by mycorrhizal symbiosis. Plant Cell Reports, 43, Article 54. https://doi.org/10.1007/s00299-023-03138-y

Moura, M., Zerbini, F., Silva, D., & Queiroz, M. (2005). Reaction of Cucurbita accessions to zucchini yellow mosaic virus. Horticultura Brasileira, 23(2), 206–210. https://doi.org/10.1590/S0102-05362005000200009

Navasca, A., Castleberry, C., Benz, B. R., & Baldwin, T. (2025). Quantitative assessment of Fusarium graminearum infection in resistant and susceptible barley genotypes beyond visual symptoms. Phytopathology. Advance online publication. https://doi.org/10.1094/PHYTO-07-25-0254-R

Ndunguru, J., & Rajabu, A. C. (2004). Effect of okra mosaic virus disease on the above-ground morphological yield components of okra in Tanzania. Scientia Horticulturae, 99(3–4), 225–235. https://doi.org/10.1016/S0304-4238(03)00108-0

Nutter, F. W., Jr., Teng, P. S., & Shokes, F. M. (1991). Disease assessment terms and concepts. Plant Disease, 75(11), 1187–1188. https://doi.org/10.1094/pd-75-1187

Pachner, M., Paris, H. S., & Lelley, T. (2011). Genes for resistance to zucchini yellow mosaic in tropical pumpkin. Journal of Heredity, 102(3), 330–335. https://doi.org/10.1093/jhered/esr006

Paris, H. S., Cohen, S., Burger, Y., et al. (1988). Monogenic resistance to zucchini yellow mosaic virus in Cucurbita moschata. Euphytica, 37, 27–29. https://doi.org/10.1007/BF00037219

Park, Y. H., Sensoy, S., Wye, C., Antonise, R., Peleman, J., & Havey, M. J. (2000). A genetic map of cucumber composed of RAPDs, RFLPs, AFLPs, and loci conditioning resistance to papaya ringspot and zucchini yellow mosaic viruses. Genome, 43(6), 1003–1010. https://doi.org/10.1139/g00-075

Riquelme-Verastegui, P. R., Montes-Yarasca, I. M., Galvez-Gargurevich, M., French-Monar, R., & Risco-Mendoza, A. (2026). Molecular and biological characterization of Peruvian isolates of zucchini yellow mosaic virus reveals differential severity and partial resistance breakdown in zucchini cultivars. Brazilian Journal of Biology, 86. https://doi.org/10.1590/1519-6984.308794

Sabharwal, P., Thakur, S., Shrestha, S., Fu, Y., & Meru, G. (2024). Breeding and genetics of resistance to major diseases in Cucurbita: A review. Crop Science. https://doi.org/10.1002/csc2.21358

Saldaña Serrano, C. L., Estrada Cañari, R., Suca, E., Cruz Grimaldo, C. L., Vilcara, E., & Arbizu Berrocal, C. I. (2024). Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species [Preprint]. Research Square. https://doi.org/10.21203/rs.3.rs-5034257/v1

Schafleitner, R., Chen-yu, L., Laenoi, S., Shu-mei, H., Srimat, S., Gi-An, L., … Dhillon, N. P. S. (2024). Molecular markers associated with resistance to squash leaf curl China virus and tomato leaf curl New Delhi virus in tropical pumpkin (Cucurbita moschata Duchesne ex Poir.) breeding line AVPU1426. Scientific Reports, 14(1). https://doi.org/10.1038/s41598-024-57348-9

Shah, D. A., & Madden, L. V. (2004). Nonparametric analysis of ordinal data in designed factorial experiments. Phytopathology, 94(1), 33–43. https://doi.org/10.1094/PHYTO.2004.94.1.33

Shafie, R. M., kheder, A. A., Abou-Attia, M. A., Mahmoud, N. A., Saied, S. M., Mazyad, A. A., & Abdelkader, H. S. (2026). Molecular and enzymatic insights into biocontrol-mediated resistance against Zucchini yellow mosaic virus in squash (Cucurbita pepo L.). BMC Microbiology, 26(1). https://doi.org/10.1186/s12866-026-05161-x

Shi, T., Liu, Y., Zheng, X., Hu, K., Huang, H., Liu, H., & Huang, H. (2023). Recent advances in plant disease severity assessment using convolutional neural networks. Scientific Reports, 13(1), 2916. https://doi.org/10.1038/s41598-023-29230-7

Shrestha, S., Michael, V. N., Fu, Y., & Meru, G. (2021). Genetic loci associated with resistance to zucchini yellow mosaic virus in squash. Plants, 10(9), 1935. https://doi.org/10.3390/plants10091935

Shrestha, S., Fu, Y., Michael, V. N., & Meru, G. (2022). Whole genome re-sequencing and bulk segregant analysis reveals chromosomal location for papaya ringspot virus W resistance in squash. Frontiers in Plant Science, 13, 848631. https://doi.org/10.3389/fpls.2022.848631

Silva, G. T. M. de A., Lima, J. A. de A., Barbosa, G. da S., Souza, Ê. G. F., Oliveira, G. B. S., Queiróz, M. A. de, Silveira, L. M. da, Nascimento, A. K. Q. do, & Júnior, A. P. B. (2019). Selection of watermelon accessions for resistance to some important potyvirus species based on serological evaluation. Australian Journal of Crop Science, 1409. https://doi.org/10.21475/ajcs.19.13.09.p1203

Simmons, H. E., Holmes, E. C., & Stephenson, A. G. (2011). Rapid turnover of intra-host genetic diversity in zucchini yellow mosaic virus. Virus Research, 155(2), 389–396. https://doi.org/10.1016/j.virusres.2010.11.011

Sofy, M. R., Sharaf, A. E. M. A., Noufl, M., & Sofy, A. R. (2014). Physiological and biochemical responses in Cucurbita pepo leaves associated with some elicitors-induced systemic resistance against zucchini yellow mosaic virus. International Journal of Modern Botany, 4(2), 61–74. https://doi.org/10.5923/j.ijmb.20140402.04

Svoboda, J., Leisova-Svobodova, L., & Amano, M. (2013). Evaluation of selected cucurbitaceous vegetables for resistance to zucchini yellow mosaic virus. Plant Disease, 97(10), 1316–1321. https://doi.org/10.1094/PDIS-11-12-1009-RE

Turechek, W. W. (2004). Nonparametric tests in plant disease epidemiology: Characterizing disease associations. Phytopathology, 94(9), 1018–1021. https://doi.org/10.1094/PHYTO.2004.94.9.1018

Valencia, R., Montes, I., Dueñas, A., Blawid, R., & Risco, A. (2025). First report of zucchini yellow mosaic virus (ZYMV) infecting Cucurbita maxima in Peru. Plant Disease, 109(12), 2616. https://doi.org/10.1094/PDIS-01-25-0127-PDN

Wang, F., Qin, G., Sui, Z., Wang, Z., Wang, Z., Yu, J., & Zhang, J. (2006). Improved method for assaying maize plant resistance to maize rough dwarf disease by artificial inoculation and real-time RT-PCR. European Journal of Plant Pathology, 116(4), 289–300. https://doi.org/10.1007/s10658-006-9060-1

Wobbrock, J. O., Findlater, L., Gergle, D., & Higgins, J. J. (2011). The aligned rank transform for nonparametric factorial analyses using only ANOVA procedures. In Proceedings of the SIGCHI Conference on Human Factors in Computing Systems (pp. 143–146). Association for Computing Machinery. https://doi.org/10.1145/1978942.1978963

Wutue, A. S., Mumo, N. N., Maithya, J. K., & Ateka, E. M. (2025). Severity, incidence and distribution of Moroccan watermelon mosaic virus infecting cucurbits in selected counties in Kenya. African Journal of Microbiology Research, 19(10), 236–242. https://doi.org/10.5897/AJMR2025.9814

Xu, Y., Kang, D., Shi, Z., Shen, H., & Wehner, T. (2004). Inheritance of resistance to zucchini yellow mosaic virus and watermelon mosaic virus in watermelon. Journal of Heredity, 95(6), 498–502. https://doi.org/10.1093/jhered/esh076

Descargas

Publicado

2026-10-22

Número

Sección

Artículos de Revisión

Cómo citar

Gonzales-Borda, F., Marin-Gil, D., Montes-Yarasca, I., Dueñas-Dávila, A., & Risco-Mendoza, A. (2026). A validated ordinal diagrammatic severity scale for zucchini yellow mosaic virus in Cucurbita moschata: Screening for tolerant accessions in Peru. Scientia Agropecuaria, 17(4), 943-961. https://doi.org/10.17268/sci.agropecu.2025.062